Chr | Markers | Haplotype | F cases | F controls | Score | p-value | p-sim |
---|---|---|---|---|---|---|---|
1 | rs1801131-rs1801133 | A-C | 0.348 | 0.402 | −0.916 | 0.360 | 0.329 |
1 | rs1801131-rs1801133 | A-T | 0.340 | 0.228 | 1.852 | 0.064 | 0.06 |
1 | rs1801131-rs1801133 | C-C | 0.312 | 0.370 | −0.914 | 0.361 | 0.324 |
1 | rs1801131-rs1801133 | C-T | 0.000 | 0.000 | NA | NA | NA |
7 | rs1045642-rs2032582 | C-A | 0.021 | 0.022 | −0.048 | 0.962 | 1 |
7 | rs1045642-rs2032582 | C-G | 0.401 | 0.435 | −0.530 | 0.596 | 0.557 |
7 | rs1045642-rs2032582 | C-T | 0.008 | 0.000 | NA | NA | NA |
7 | rs1045642-rs2032582 | T-G | 0.154 | 0.174 | −0.432 | 0.666 | 0.694 |
7 | rs1045642-rs2032582 | T-T | 0.415 | 0.370 | 0.758 | 0.448 | 0.422 |
10 | rs717620-rs2273697-rs3740066 | A-A-A | 0.000 | 0.000 | NA | NA | NA |
10 | rs717620-rs2273697-rs3740066 | A-G-A | 0.201 | 0.250 | −0.852 | 0.394 | 0.427 |
10 | rs717620-rs2273697-rs3740066 | A-G-G | 0.000 | NA | NA | NA | NA |
10 | rs717620-rs2273697-rs3740066 | G-A-A | 0.023 | 0.018 | NA | NA | NA |
10 | rs717620-rs2273697-rs3740066 | G-A-G | 0.227 | 0.221 | 0.070 | 0.944 | 0.961 |
10 | rs717620-rs2273697-rs3740066 | G-G-A | 0.182 | 0.112 | 1.465 | 0.143 | 0.153 |
10 | rs717620-rs2273697-rs3740066 | G-G-G | 0.367 | 0.399 | −0.466 | 0.641 | 0.639 |
10 | rs717620-rs2273697 | A-A | 0.000 | 0.000 | NA | NA | NA |
10 | rs717620-rs2273697 | A-G | 0.201 | 0.250 | −0.852 | 0.394 | 0.36 |
10 | rs717620-rs2273697 | G-A | 0.250 | 0.239 | 0.168 | 0.867 | 0.84 |
10 | rs717620-rs2273697 | G-G | 0.549 | 0.511 | 0.537 | 0.591 | 0.572 |
10 | rs2273697-rs3740066 | A-A | 0.021 | 0.017 | NA | NA | NA |
10 | rs2273697-rs3740066 | A-G | 0.229 | 0.223 | 0.110 | 0.913 | 0.936 |
10 | rs2273697-rs3740066 | G-A | 0.386 | 0.364 | 0.376 | 0.707 | 0.732 |
10 | rs2273697-rs3740066 | G-G | 0.364 | 0.397 | −0.526 | 0.599 | 0.587 |
11 | rs1176744-rs1062613-rs1985242-rs1176713 | G-C-A-C | 0.071 | 0.043 | 0.558 | 0.577 | 0.569 |
11 | rs1176744-rs1062613-rs1985242-rs1176713 | G-C-T-T | 0.029 | 0.008 | NA | NA | NA |
11 | rs1176744-rs1062613-rs1985242-rs1176713 | G-T-A-T | 0.220 | 0.156 | 1.153 | 0.249 | 0.265 |
11 | rs1176744-rs1062613-rs1985242-rs1176713 | T-C-A-C | 0.041 | 0.035 | 0.066 | 0.948 | 0.972 |
11 | rs1176744-rs1062613-rs1985242-rs1176713 | T-C-T-T | 0.000 | 0.051 | NA | NA | NA |
11 | rs1176744-rs1062613-rs1985242-rs1176713 | T-T-A-C | 0.001 | NA | NA | NA | NA |
11 | rs1176744-rs1062613-rs1985242-rs1176713 | T-T-A-T | 0.029 | 0.063 | −1.030 | 0.303 | 0.287 |
11 | rs1176744-rs1062613-rs1985242 | G-C-A | NA | 0.016 | NA | NA | NA |
11 | rs1176744-rs1062613-rs1985242 | G-C-T | 0.513 | 0.496 | 0.406 | 0.685 | 0.693 |
11 | rs1176744-rs1062613-rs1985242 | G-T-A | 0.048 | 0.098 | −1.430 | 0.153 | 0.153 |
11 | rs1176744-rs1062613-rs1985242 | T-C-A | 0.034 | 0.034 | −1.283 | 0.199 | 0.142 |
11 | rs1176744-rs1062613-rs1985242 | T-C-T | 0.016 | NA | NA | NA | NA |
11 | rs1176744-rs1062613-rs1985242 | T-T-A | 0.097 | 0.054 | 0.822 | 0.411 | 0.397 |
11 | rs1176744-rs1062613-rs1985242 | T-T-T | 0.218 | 0.164 | 1.219 | 0.223 | 0.23 |
11 | rs1062613-rs1985242-rs1176713 | C-A-C | 0.045 | 0.075 | −1.052 | 0.293 | 0.276 |
11 | rs1062613-rs1985242-rs1176713 | C-A-T | 0.001 | NA | NA | NA | NA |
11 | rs1062613-rs1985242-rs1176713 | C-T-T | 0.030 | 0.077 | −1.331 | 0.183 | 0.186 |
11 | rs1062613-rs1985242-rs1176713 | T-A-C | 0.516 | 0.488 | 0.355 | 0.722 | 0.735 |
11 | rs1062613-rs1985242-rs1176713 | T-A-T | 0.078 | 0.142 | −1.947 | 0.052 | 0.054 |
11 | rs1062613-rs1985242-rs1176713 | T-T-T | 0.015 | NA | NA | NA | NA |
11 | rs1176744-rs1062613 | G-C | 0.099 | 0.106 | −0.190 | 0.849 | 0.862 |
11 | rs1176744-rs1062613 | G-T | 0.028 | 0.025 | 0.094 | 0.925 | 0.982 |
11 | rs1176744-rs1062613 | T-C | 0.734 | 0.652 | 1.486 | 0.137 | 0.129 |
11 | rs1176744-rs1062613 | T-T | 0.088 | 0.133 | −1.048 | 0.295 | 0.302 |
11 | rs1062613-rs1985242 | C-A | 0.034 | 0.084 | −1.688 | 0.091 | 0.126 |
11 | rs1062613-rs1985242 | C-T | 0.016 | 0.000 | NA | NA | NA |
11 | rs1062613-rs1985242 | T-A | 0.323 | 0.224 | 1.489 | 0.137 | 0.137 |
11 | rs1062613-rs1985242 | T-T | 0.038 | 0.070 | −0.848 | 0.396 | 0.379 |
11 | rs1985242-rs1176713 | A-C | 0.538 | 0.559 | −0.078 | 0.937 | 0.953 |
11 | rs1985242-rs1176713 | A-T | 0.101 | 0.148 | −1.663 | 0.096 | 0.098 |
11 | rs1985242-rs1176713 | T-C | 0.128 | 0.130 | −0.136 | 0.892 | 0.868 |
11 | rs1985242-rs1176713 | T-T | 0.734 | 0.652 | 1.488 | 0.137 | 0.126 |
12 | rs2117032-rs4149056-rs4149081 | C-C-A | 0.082 | 0.045 | 0.914 | 0.361 | 0.392 |
12 | rs2117032-rs4149056-rs4149081 | C-C-G | 0.000 | 0.000 | NA | NA | NA |
12 | rs2117032-rs4149056-rs4149081 | C-T-G | 0.279 | 0.325 | −0.596 | 0.551 | 0.554 |
12 | rs2117032-rs4149056-rs4149081 | C-T-T | 0.092 | 0.097 | 0.172 | 0.864 | 0.855 |
12 | rs2117032-rs4149056-rs4149081 | T-C-A | 0.014 | 0.022 | NA | NA | NA |
12 | rs2117032-rs4149056-rs4149081 | T-C-C | 0.533 | 0.512 | 0.162 | 0.872 | 0.895 |
12 | rs2117032-rs4149056-rs4149081 | T-T-G | 0.082 | 0.046 | 0.904 | 0.366 | 0.368 |
12 | rs2117032-rs4149056 | C-C | 0.279 | 0.324 | −0.593 | 0.553 | 0.566 |
12 | rs2117032-rs4149056 | C-T | 0.091 | 0.096 | 0.177 | 0.860 | 0.828 |
12 | rs2117032-rs4149056 | T-C | 0.547 | 0.535 | 0.039 | 0.969 | 0.984 |
12 | rs2117032-rs4149056 | T-T | 0.174 | 0.141 | 0.660 | 0.509 | 0.586 |
12 | rs4149056-rs4149081 | C-A | 0.014 | 0.022 | NA | NA | NA |
12 | rs4149056-rs4149081 | C-C | 0.813 | 0.837 | −0.490 | 0.624 | 0.681 |
12 | rs4149056-rs4149081 | C-G | 0.082 | 0.045 | 0.914 | 0.361 | 0.392 |
12 | rs4149056-rs4149081 | C-T | 0.000 | 0.000 | NA | NA | NA |
12 | rs4149056-rs4149081 | T-C | 0.279 | 0.325 | −0.596 | 0.551 | 0.554 |
12 | rs4149056-rs4149081 | T-G | 0.092 | 0.097 | 0.172 | 0.864 | 0.855 |
12 | rs4149056-rs4149081 | T-T | 0.014 | 0.022 | NA | NA | NA |